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Applications

16S & 28S amplicon sequencing

GINA and PCR-Box also work outside the hybcell workflow: as sample preparation and PCR for your own 16S and 28S amplicon sequencing — Sanger or NGS.

Why it matters

Early results - optimised therapy

Earlier to result

Comprehensive pathogen ID directly from whole blood and other sample matrices in less than 3 hours — no culturing required.

Additional results

Additional results from DNA-based detection of pathogens that are difficult to culture (fungi, fastidious bacteria, anaerobes) or for patients who have already undergone treatment.

Versatile multiplexing

Sepsis, other severe infections (pneumonia, etc.), or general 16S/28S amplicon sequencing—the same platform, the same products, multiple applications.

Amplicon sequencing · 16S / 28S, Sanger or NGS
16Span-bacterial PCR · plus 28S pan-fungal
Sample prep
Enrichment of microbes
DNA extraction
Columns or magnetic beads

PCR-Box Bacteria is a pan-bacterial 16S PCR mix, PCR-Box Fungi a pan-fungal 28S PCR mix. Beside compact sequencing on the hybcell, the amplicons are ready for state-of-the-art 16S and 28S sequencing (Sanger, NGS). From whole blood, GINA first depletes human DNA and enriches the microbial DNA.

  • Ready-to-use PCR mixes, single reactions in 0.2 mL tubes
  • Extremely sensitive, with the possibility of RNA transcription
  • Hot-start functionality and UNG carry-over protection
  • Manufactured under cleanroom conditions
  1. 01

    Sample preparation

    • GINA 500
  2. 02

    DNA extraction & PCR

    • GINA DNA Purification
    • 3rd party DNA extraction
    • PCR-Box Bacteria
    • PCR-Box Fungi
  3. 03

    Sequencing

    • Sanger
    • NGS
Evidence

16S sequencing — literature

The cube dx PCR has been compared with in-house PCR and 16S sequencing:

  1. 2026Performance comparison to in-house PCR and 16S sequencing
Interested?

Let's talk about your sequencing workflow

We'll help you fit GINA and PCR-Box into your lab's sequencing workflow.

Get in touch
Christoph Reschreiter, Management, cube dx